resultsMatrix | R Documentation |
Generate an aggregate matrix of DESeqResults
column values per contrast.
resultsMatrix(object, ...) ## S4 method for signature 'DESeqAnalysis' resultsMatrix( object, value = c("log2FoldChange", "stat", "alpha"), rowData = FALSE ) ## S4 method for signature 'DESeqAnalysisList' resultsMatrix( object, value = c("log2FoldChange", "stat", "alpha"), rowData = FALSE )
object |
Object. |
value |
|
rowData |
|
... |
Additional arguments. |
rowData = FALSE
: matrix
.
rowData = TRUE
: DataFrame
.
resultsMatrix,DESeqAnalysisList-method
: Loop across the nested DESeqAnalysis
objects and
aggregate the corresponding result matrices. Note that the analysis names
are automatically prefixed to the column names.
Updated 2022-05-17.
data(deseq) ## DESeqAnalysis ==== x <- resultsMatrix(deseq) head(x)
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