plotPca: Principal component analysis plot
In steinbaugh/DESeqAnalysis: Acid Genomics DESeq2 Analysis Utilities
plotPca R Documentation
Principal component analysis plot
Description
Principal component analysis plot
Usage
plotPca(object, ...)
## S4 method for signature 'DESeqAnalysis'
plotPca(object, ...)
Arguments
object
Object.
...
Additional arguments.
Details
Passes to SummarizedExperiment defined in AcidPlots package.
Value
ggplot.
Functions
-
plotPca(DESeqAnalysis): Extracts DESeqTransform, converts to
RangedSummarizedExperiment, and passes to method defined in AcidPlots.
Note
Updated 2022-09-27.
See Also
-
DESeq2::plotPCA.
Examples
data(deseq)
## DESeqAnalysis ====
plotPca(deseq)
steinbaugh/DESeqAnalysis documentation built on April 1, 2024, 8:30 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
| plotPca | R Documentation |
Principal component analysis plot
Description
Principal component analysis plot
Usage
plotPca(object, ...)
## S4 method for signature 'DESeqAnalysis'
plotPca(object, ...)
Arguments
object |
Object. |
... |
Additional arguments. |
Details
Passes to SummarizedExperiment defined in AcidPlots package.
Value
ggplot.
Functions
-
plotPca(DESeqAnalysis): ExtractsDESeqTransform, converts toRangedSummarizedExperiment, and passes to method defined in AcidPlots.
Note
Updated 2022-09-27.
See Also
-
DESeq2::plotPCA.
Examples
data(deseq)
## DESeqAnalysis ====
plotPca(deseq)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.