lfcShrinkType: Shrunken log2 fold change (LFC) type
In steinbaugh/DESeqAnalysis: DESeq2 Analysis Utilities
Description
Usage
Arguments
Value
Note
See Also
Examples
Description
Shrunken log2 fold change (LFC) type
Usage
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lfcShrinkType(object, ...)
## S4 method for signature 'DESeqResults'
lfcShrinkType(object)
## S4 method for signature 'DESeqAnalysis'
lfcShrinkType(object)
Arguments
object
Object.
...
Additional arguments.
Value
character(1) or NULL.
Name of adaptive shrinkage method applied (e.g. "apeglm" or "ashr").
Note
Updated 2020-08-04.
See Also
Examples
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data(deseq)
## DESeqAnalysis ====
lfcShrinkType(deseq)
steinbaugh/DESeqAnalysis documentation built on Oct. 15, 2020, 2:02 a.m.
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Description Usage Arguments Value Note See Also Examples
Description
Shrunken log2 fold change (LFC) type
Usage
1 2 3 4 5 6 7 | lfcShrinkType(object, ...)
## S4 method for signature 'DESeqResults'
lfcShrinkType(object)
## S4 method for signature 'DESeqAnalysis'
lfcShrinkType(object)
|
Arguments
object |
Object. |
... |
Additional arguments. |
Value
character(1) or NULL.
Name of adaptive shrinkage method applied (e.g. "apeglm" or "ashr").
Note
Updated 2020-08-04.
See Also
Examples
1 2 3 4 | data(deseq)
## DESeqAnalysis ====
lfcShrinkType(deseq)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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