degPerContrast | R Documentation |
Base mean threshold
degPerContrast(object, ...) ## S4 method for signature 'DESeqAnalysis' degPerContrast( object, i = NULL, direction = c("both", "up", "down"), return = c("matrix", "list") )
object |
Object. |
i |
|
direction |
|
return |
|
... |
Additional arguments. |
matrix
: Matrix containing numbers of DEGs per contrast.
Intended primarily for use with plotDEGStackedBar()
.
list
: Named vector containing the DEG identifiers.
Intended primarily for use with plotDEGUpset()
.
Updated 2022-05-18.
data(deseq) ## DESeqAnalysis ==== degPerContrast(deseq)
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.