combine: Combine multiple objects

In steinbaugh/DESeqAnalysis: Acid Genomics DESeq2 Analysis Utilities

Combine multiple objects

Description

Combine multiple objects

Usage

combine(x, y, ...)

## S4 method for signature 'DESeqAnalysis,DESeqAnalysis'
combine(x, y)

Arguments

x	Object.
y	Object.
...	Additional arguments.

Details

Combines the results from 2 separate DESeqAnalysis objects. Note that the internal DESeqDataSet and DESeqTransform objects slotted in x and y must be identical. The respective results must not contain any intersecting names. The lfcShrink slot is optional but must be either defined in both objects or NULL in both objects.

Value

Modified object.

Note

Updated 2022-03-08.

Examples

data(deseq)

## DESeqAnalysis ====
x <- deseq
y <- deseq
resultsNames(x) <- paste0("x_", resultsNames(x))
resultsNames(y) <- paste0("y_", resultsNames(y))

object <- combine(x, y)
resultsNames(object)

steinbaugh/DESeqAnalysis documentation built on June 9, 2025, 7:56 a.m.