initialize-tgMC2D-method: Construct a meta cell 2D embedding
In tanaylab/metacell: Meta cell analysis for single cell RNA-seq data
initialize,tgMC2D-method R Documentation
Construct a meta cell 2D embedding
Description
Just filling up the slots, actuall computation is done by specific algorithms (mcell_mc2d_force)
Usage
## S4 method for signature 'tgMC2D'
initialize(.Object, mc_id, mc_x, mc_y, sc_x, sc_y, graph)
Arguments
mc_x
x coordinates of metacells
mc_y
y coordinates of metacells
sc_x
x coordinates of cells
sc_y
y coordinates of cells
graph
data.frame with fields mc1, mc2 definining the graph
mc
metacell object
tanaylab/metacell documentation built on Jan. 29, 2025, 1:34 a.m.
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| initialize,tgMC2D-method | R Documentation |
Construct a meta cell 2D embedding
Description
Just filling up the slots, actuall computation is done by specific algorithms (mcell_mc2d_force)
Usage
## S4 method for signature 'tgMC2D'
initialize(.Object, mc_id, mc_x, mc_y, sc_x, sc_y, graph)
Arguments
mc_x |
x coordinates of metacells |
mc_y |
y coordinates of metacells |
sc_x |
x coordinates of cells |
sc_y |
y coordinates of cells |
graph |
data.frame with fields mc1, mc2 definining the graph |
mc |
metacell object |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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