initialize-tgMCCov-method: Construct a meta cell object

initialize,tgMCCov-methodR Documentation

Construct a meta cell object

Description

This constructs a meta cell cover object. It gets an MC assignment (cell->MC_ID), and a matrix, and call standard api of this class to compute the footprints.

Usage

## S4 method for signature 'tgMCCov'
initialize(.Object, mc, outliers = character(length = 0), scmat)

Arguments

mc

assignment of metacell id to cell

scmat

a single cell RNA matrix object


tanaylab/metacell documentation built on Oct. 19, 2023, 1:01 p.m.