mcatlas_comp_adj_type_n: Compute the summary matrix of cell type adjacencies
In tanaylab/metacell: Meta cell analysis for single cell RNA-seq data
mcatlas_comp_adj_type_n R Documentation
Compute the summary matrix of cell type adjacencies
Description
Compute the summary matrix of cell type adjacencies
Usage
mcatlas_comp_adj_type_n(mc, graph, color_type_id)
Arguments
mc
metacell object for defining colors/type per cell
cgraph
cell-cell knn graph
color_ype_id
named vector mapping colors to IDs
Value
summary matrix with cells in rows, types in columns
tanaylab/metacell documentation built on Oct. 19, 2023, 1:01 p.m.
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| mcatlas_comp_adj_type_n | R Documentation |
Compute the summary matrix of cell type adjacencies
Description
Compute the summary matrix of cell type adjacencies
Usage
mcatlas_comp_adj_type_n(mc, graph, color_type_id)
Arguments
mc |
metacell object for defining colors/type per cell |
cgraph |
cell-cell knn graph |
color_ype_id |
named vector mapping colors to IDs |
Value
summary matrix with cells in rows, types in columns
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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