mcell_coclust_from_graph_resamp: Compute metacell using resampling iterations of graph cover...

In tanaylab/metacell: Meta cell analysis for single cell RNA-seq data

Compute metacell using resampling iterations of graph cover k-means-like approach

Description

Compute metacell using resampling iterations of graph cover k-means-like approach

Usage

mcell_coclust_from_graph_resamp(
  coc_id,
  graph_id,
  min_mc_size,
  p_resamp,
  n_resamp
)

Arguments

graph_id	a knn graph object id into scdb
min_mc_size	target minimum metacell size. This is only an approximation and smaller MC may be returned by the algorithm
mc_id	id of metacell object to be added
mat_id	a matrix object id
resamp_n	number of resampling iterations

tanaylab/metacell documentation built on Jan. 29, 2025, 1:34 a.m.