mcell_graph_pred_corr: Compute predictive value of MC cover as correlation of MC...
In tanaylab/metacell: Meta cell analysis for single cell RNA-seq data
mcell_graph_pred_corr R Documentation
Compute predictive value of MC cover as correlation of MC averages of sc umis
Description
Compute predictive value of MC cover as correlation of MC averages of sc umis
Usage
mcell_graph_pred_corr(
mat_id,
graph_id,
do_log = F,
focus_cells = NULL,
filt_genes = NULL
)
Arguments
mat_id
id of matrix to analyze
graph_id
id of cgraph to use for computing neighborhood per cell
do_log
should log transofmration be performed
focus_cells
should correltion be computed to a specific set of cells
tanaylab/metacell documentation built on Jan. 29, 2025, 1:34 a.m.
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| mcell_graph_pred_corr | R Documentation |
Compute predictive value of MC cover as correlation of MC averages of sc umis
Description
Compute predictive value of MC cover as correlation of MC averages of sc umis
Usage
mcell_graph_pred_corr(
mat_id,
graph_id,
do_log = F,
focus_cells = NULL,
filt_genes = NULL
)
Arguments
mat_id |
id of matrix to analyze |
graph_id |
id of cgraph to use for computing neighborhood per cell |
do_log |
should log transofmration be performed |
focus_cells |
should correltion be computed to a specific set of cells |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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