mcell_add_cgraph_from_mat_raw_knn: Build a cell graph using raw knn graph on given gene features

In tanaylab/metacell: Meta cell analysis for single cell RNA-seq data

Build a cell graph using raw knn graph on given gene features

Description

Build a cell graph using raw knn graph on given gene features

Usage

mcell_add_cgraph_from_mat_raw_knn(mat_id, gset_id, graph_id, K, dsamp = F)

Arguments

mat_id	matrix object id
gset_id	gset object id defining the features used for distances
graph_id	new graph id to create
K	the guideline Knn parameter. The balanced will be constructed aiming at K edges per cell

tanaylab/metacell documentation built on Jan. 29, 2025, 1:34 a.m.