parse_spike_UMI: parse out the forward and reverse UMIs and contig for a...
In trichelab/spiky: Spike-in calibration for cell-free MeDIP
View source: R/parse_spike_UMI.R
parse_spike_UMI R Documentation
parse out the forward and reverse UMIs and contig for a BED/BAM
Description
parse out the forward and reverse UMIs and contig for a BED/BAM
Usage
parse_spike_UMI(UMI, pos = NULL, seqs = NULL)
Arguments
UMI
a vector of UMIs
pos
optional vector of positions (else all are set to 1)
seqs
optional vector of read sequences (else widths default to 96)
Value
a GRanges
trichelab/spiky documentation built on Sept. 17, 2022, 8:44 a.m.
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View source: R/parse_spike_UMI.R
| parse_spike_UMI | R Documentation |
parse out the forward and reverse UMIs and contig for a BED/BAM
Description
parse out the forward and reverse UMIs and contig for a BED/BAM
Usage
parse_spike_UMI(UMI, pos = NULL, seqs = NULL)
Arguments
UMI |
a vector of UMIs |
pos |
optional vector of positions (else all are set to 1) |
seqs |
optional vector of read sequences (else widths default to 96) |
Value
a GRanges
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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