WGBSeq: wrapper for WGBS settings appropriate to dmrseq
In ttriche/biscuitEater: a bunch of convenience functions for Biscuit
Description
Usage
Arguments
Value
Description
wrapper for WGBS settings appropriate to dmrseq
Usage
1
Arguments
bs
a bsseq object
testCovariate
the pData column to test on
bpSpan
span of smoother AND 2x max gap in DMR CpGs (1000)
...
other arguments to pass along to dmrseq
Value
1
a GRanges object (same as from dmrseq)
ttriche/biscuitEater documentation built on May 15, 2019, 4:18 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value
Description
wrapper for WGBS settings appropriate to dmrseq
Usage
1 |
Arguments
bs |
a bsseq object |
testCovariate |
the pData column to test on |
bpSpan |
span of smoother AND 2x max gap in DMR CpGs (1000) |
... |
other arguments to pass along to dmrseq |
Value
1 | a GRanges object (same as from dmrseq)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.