plotSegs: plotting WGBScopy results (modified from HMMcopy)

Description Usage Arguments

Description

plotting WGBScopy results (modified from HMMcopy)

Usage

1
plotSegs(cn, segs = NULL, chr = "chr22", name = "Segmented", ...)

Arguments

cn

binned, corrected read depths from correctCoverage()

segs

a segmentation result from WGBScopy()

chr

what chromosome to display (chr22)

name

a name for the plot ("Segmented")

...

other arguments to pass on to plot


ttriche/biscuitEater documentation built on May 15, 2019, 4:18 p.m.