Description Usage Arguments Value
Summarize methylation over regions. Mostly a wrapper for getMeth.
1 | summarizeBsSeqOver(bsseq, segs, dropNA = FALSE, impute = FALSE)
|
bsseq |
the BSseq object to summarize |
segs |
regions to summarize over (a GRanges; no GRangesLists yet) |
dropNA |
whether to drop rows with > half of samples NaN (FALSE) |
impute |
whether to impute NAs/NaNs (FALSE) |
matrix a matrix of regional methylation fractions
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