unionizeBSseq: Smoosh a couple of BSseq objects together, sensibly.
In ttriche/biscuitEater: a bunch of convenience functions for Biscuit
Description
Usage
Arguments
Value
Description
take two bsseq objects and the overlaps of the union of their rowRanges,
pad out un-covered sites with 0M/0Cov (i.e., ./. in a sparse Matrix),
and return a Matrix containing the joint information from both.
Usage
1
unionizeBSseq(bs1, bs2, biggrl, what = c("M", "Cov"), parallel = TRUE)
Arguments
bs1
a BSseq object
bs2
another BSseq object
biggrl
a GRangesList with (bs1-only, both, bs2-only) regions
what
"M" (methylation) or "Cov" (coverage)
Value
a DelayedMatrix
ttriche/biscuitEater documentation built on May 15, 2019, 4:18 p.m.
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Description Usage Arguments Value
Description
take two bsseq objects and the overlaps of the union of their rowRanges, pad out un-covered sites with 0M/0Cov (i.e., ./. in a sparse Matrix), and return a Matrix containing the joint information from both.
Usage
1 | unionizeBSseq(bs1, bs2, biggrl, what = c("M", "Cov"), parallel = TRUE)
|
Arguments
bs1 |
a BSseq object |
bs2 |
another BSseq object |
biggrl |
a GRangesList with (bs1-only, both, bs2-only) regions |
what |
"M" (methylation) or "Cov" (coverage) |
Value
a DelayedMatrix
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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