Description Usage Arguments Value Author(s) See Also Examples
Split interaction subset from 2 sets so that each elements contains only one of the proteins from set 2, and retrieve FASTA sequences for each
1 2 | listSingleInteractFromSet2(subset1, single_interact_from_set2, set1_only,
fasta)
|
subset1 |
interaction_subset_from_2_sets object produced by |
single_interact_from_set2 |
logical, split sequence sets to contain only one protein from interaction_set2 (only one query protein for QSLIMFinder). If FALSE, set2 will contain all proteins that interact with an element of |
set1_only |
logical, only relevant if |
fasta |
list containing AAStringSet renamed by |
object of class InteractionSubsetFASTA_list containing: FASTA sequences for interacting proteins, molecular interaction data they correspond to. Each element of a list contains input for individual QSLIMFinder run.
Vitalii Kleshchevnikov
subset2setsBy1ID
, listInteractionSubsetFASTA
1 | subset1_fasta = listSingleInteractFromSet2(subset1, single_interact_from_set2, set1_only, fasta)
|
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