Description Usage Arguments Value Author(s) See Also Examples
Write InteractionSubsetFASTA_list into directory system (creating directories as necessary) and return file locations for QSLIMFinder
1 2 3 | writeInteractionSubsetFASTA_list(interactionFASTA_list,
dir = "./SLIMFinder/", analysis_type = c("qslimfinder",
"slimfinder")[1])
|
interactionFASTA_list |
object of class InteractionSubsetFASTA_list created by |
dir |
directory where to write interactionFASTA_list |
analysis_type |
character 1L, qslimfinder or slimfinder. slimfinder doesn't need query: identical datasets with the same query will be removed and query files not written) |
data.table containing path to files and directories for QSLIMFinder: fastafile, queryfile, outputdir, outputfile
Vitalii Kleshchevnikov
1 2 | forSLIMFinder_file_list = writeInteractionSubsetFASTA_list(interactionFASTA_list = forSLIMFinder_Ready,
dir = "./SLIMFinder/")
|
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