openSesameToFile: openSesame pipeline with file-backed storage
In zwdzwd/sesame: SEnsible Step-wise Analysis of DNA MEthylation BeadChips
openSesameToFile R Documentation
openSesame pipeline with file-backed storage
Description
openSesame pipeline with file-backed storage
Usage
openSesameToFile(map_path, idat_dir, BPPARAM = SerialParam(), inc = 4)
Arguments
map_path
path of file to be mapped (beta values file)
idat_dir
source IDAT directory
BPPARAM
get parallel with MulticoreParam(2)
inc
bytes per item data storage. increase to 8 if precision
is important. Most cases 32-bit representation is enough.
Value
a sesame::fileSet
Examples
openSesameToFile('mybetas',
system.file('extdata',package='sesameData'))
zwdzwd/sesame documentation built on Dec. 21, 2024, 1:20 p.m.
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| openSesameToFile | R Documentation |
openSesame pipeline with file-backed storage
Description
openSesame pipeline with file-backed storage
Usage
openSesameToFile(map_path, idat_dir, BPPARAM = SerialParam(), inc = 4)
Arguments
map_path |
path of file to be mapped (beta values file) |
idat_dir |
source IDAT directory |
BPPARAM |
get parallel with MulticoreParam(2) |
inc |
bytes per item data storage. increase to 8 if precision is important. Most cases 32-bit representation is enough. |
Value
a sesame::fileSet
Examples
openSesameToFile('mybetas',
system.file('extdata',package='sesameData'))
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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