openSesameToFile: openSesame pipeline with file-backed storage

View source: R/fileSet.R

openSesameToFileR Documentation

openSesame pipeline with file-backed storage

Description

openSesame pipeline with file-backed storage

Usage

openSesameToFile(map_path, idat_dir, BPPARAM = SerialParam(), inc = 4)

Arguments

map_path

path of file to be mapped (beta values file)

idat_dir

source IDAT directory

BPPARAM

get parallel with MulticoreParam(2)

inc

bytes per item data storage. increase to 8 if precision is important. Most cases 32-bit representation is enough.

Value

a sesame::fileSet

Examples


openSesameToFile('mybetas',
    system.file('extdata',package='sesameData'))


zwdzwd/sesame documentation built on Nov. 11, 2024, 9:33 a.m.