scrub: SCRUB background correction
In zwdzwd/sesame: SEnsible Step-wise Analysis of DNA MEthylation BeadChips
scrub R Documentation
SCRUB background correction
Description
This function takes a SigDF and returns a modified SigDF
with background subtracted. scrub subtracts residual background using
background median
Usage
scrub(sdf)
Arguments
sdf
a SigDF
Details
This function is meant to be used after noob.
Value
a new SigDF with noob background correction
Examples
sdf <- sesameDataGet('EPIC.1.SigDF')
sdf.nb <- noob(sdf)
sdf.nb.scrub <- scrub(sdf.nb)
zwdzwd/sesame documentation built on Dec. 21, 2024, 1:20 p.m.
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| scrub | R Documentation |
SCRUB background correction
Description
This function takes a SigDF and returns a modified SigDF
with background subtracted. scrub subtracts residual background using
background median
Usage
scrub(sdf)
Arguments
sdf |
a |
Details
This function is meant to be used after noob.
Value
a new SigDF with noob background correction
Examples
sdf <- sesameDataGet('EPIC.1.SigDF')
sdf.nb <- noob(sdf)
sdf.nb.scrub <- scrub(sdf.nb)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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