sesameQC_plotBar: Bar plots for sesameQC
In zwdzwd/sesame: SEnsible Step-wise Analysis of DNA MEthylation BeadChips
sesameQC_plotBar R Documentation
Bar plots for sesameQC
Description
By default, it plots median_beta_cg, median_beta_ch, RGratio,
RGdistort, frac_dt
Usage
sesameQC_plotBar(qcs, keys = NULL)
Arguments
qcs
a list of SigDFs
keys
optional, other key to plot, instead of the default
keys can be found in the parenthesis of the print output of each
sesameQC output.
Value
a bar plot comparing different QC metrics
Examples
sesameDataCache() # if not done yet
sdfs <- sesameDataGet("EPIC.5.SigDF.normal")[1:2]
sesameQC_plotBar(lapply(sdfs, sesameQC_calcStats, "detection"))
zwdzwd/sesame documentation built on Dec. 21, 2024, 1:20 p.m.
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| sesameQC_plotBar | R Documentation |
Bar plots for sesameQC
Description
By default, it plots median_beta_cg, median_beta_ch, RGratio, RGdistort, frac_dt
Usage
sesameQC_plotBar(qcs, keys = NULL)
Arguments
qcs |
a list of SigDFs |
keys |
optional, other key to plot, instead of the default keys can be found in the parenthesis of the print output of each sesameQC output. |
Value
a bar plot comparing different QC metrics
Examples
sesameDataCache() # if not done yet
sdfs <- sesameDataGet("EPIC.5.SigDF.normal")[1:2]
sesameQC_plotBar(lapply(sdfs, sesameQC_calcStats, "detection"))
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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