sesameQC_plotBetaByDesign: Plot betas distinguishing different Infinium chemistries
In zwdzwd/sesame: SEnsible Step-wise Analysis of DNA MEthylation BeadChips

sesameQC_plotBetaByDesign

R Documentation

Plot betas distinguishing different Infinium chemistries

Plot betas distinguishing different Infinium chemistries

sesameQC_plotBetaByDesign(
  sdf,
  prep = NULL,
  legend_pos = "top",
  mar = c(3, 3, 1, 1),
  main = "",
  ...
)

`sdf`	SigDF
`prep`	prep codes to step through
`legend_pos`	legend position (default: top)
`mar`	margin of layout when showing steps of prep
`main`	main title in plots
`...`	additional options to plot

create a density plot

sdf <- sesameDataGet("EPIC.1.SigDF")
sesameQC_plotBetaByDesign(sdf, prep="DB")

zwdzwd/sesame documentation built on Dec. 21, 2024, 1:20 p.m.

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