Extract or access the
backgroundSignal slot in a
Default Value: 0
computeOccupancy, a ChIP-seq background
signal is used to scale Occupancy by considering both a
backgroundSignal and a
is also used to nomalise occupancies against maxOccupancy.
backgroundSignal usually comes from
experimental data and is provided by user. As a general rule,
if ChIP-seq data is available and will be used in
it is advised to use the
backgroundSignal from this data.
We strongly encourage to set values when building a
backgroundSignal of a
Patrick C.N. Martin <firstname.lastname@example.org>
Zabet NR, Adryan B (2015) Estimating binding properties of transcription factors from genome-wide binding profiles. Nucleic Acids Res., 43, 84<e2><80><93>94.
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