Perform negative binomial exact test for differential expression - a modified version of nbinomTest in DESeq package.
A CountDataSet object with size factors and dispersion parameters estimated. Recommended to take the output of
A data frame of the test results. Information contains mean expression values, NB-statistics, (log) fold-changes, p-values, and adjusted p-values.
Xi Wang, [email protected]
Anders, S. and Huber, W. (2010) Differential expression analysis for sequence count data, Genome Biol, 11, R106.
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