Calculate read counts of genes from a ReadCountSet object

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Description

Calculate read counts of genes from a ReadCountSet object

Usage

1

Arguments

RCS

a ReadCountSet object

Details

This function can be used to get gene read counts from exon read counts.

Value

a matrix of gene read counts for each gene (row) and each sample (col).

Author(s)

Xi Wang, xi.wang@newcastle.edu.au

See Also

loadExonCountData, runDESeq

Examples

1
2
data(RCS_example, package="SeqGSEA")
geneCounts <- getGeneCount(RCS_example)

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