getGeneCount: Calculate read counts of genes from a ReadCountSet object

Description Usage Arguments Details Value Author(s) See Also Examples

View source: R/DSscore.R

Description

Calculate read counts of genes from a ReadCountSet object

Usage

1

Arguments

RCS

a ReadCountSet object

Details

This function can be used to get gene read counts from exon read counts.

Value

a matrix of gene read counts for each gene (row) and each sample (col).

Author(s)

Xi Wang, [email protected]

See Also

loadExonCountData, runDESeq

Examples

1
2
data(RCS_example, package="SeqGSEA")
geneCounts <- getGeneCount(RCS_example)

SeqGSEA documentation built on May 31, 2017, 3:19 p.m.