counts-methods: Accessors for the 'counts' slot of a ReadCountSet object.

In SeqGSEA: Gene Set Enrichment Analysis (GSEA) of RNA-Seq Data: integrating differential expression and splicing

Description

Accessors for the 'counts' slot of a ReadCountSet object.

Usage

## S4 method for signature 'ReadCountSet'
counts(object)
## S4 replacement method for signature 'ReadCountSet,matrix'
counts(object) <- value

Arguments

object	a ReadCountSet object
value	a matrix of read counts

Author(s)

Xi Wang, [e-mail]

Examples

data(RCS_example, package="SeqGSEA")
readCounts <- counts(RCS_example)
head(readCounts)

SeqGSEA documentation built on Nov. 8, 2020, 5:46 p.m.