DEscore: Pre-calculated DE/DS scores

Description Usage References

Description

DEscore and DSscore are pre-calculated DE and DS scores, respectively; DEscore.perm and DSscore.perm are pre-calculated DE and DS scores on the permutation data sets, respectively; They are used in examples of the SeqGSEA package. Note that these scores are of no meaning but to demonstrate the usage of functions.

Usage

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data("DEscore")
data("DEscore.perm")
data("DSscore")
data("DSscore.perm")

References

Xi Wang and Murray J. Cairns (2013). Gene Set Enrichment Analysis of RNA-Seq Data: Integrating Differential Expression and Splicing. BMC Bioinformatics, 14(Suppl 5):S16.


SeqGSEA documentation built on May 31, 2017, 3:19 p.m.