DEscore: Pre-calculated DE/DS scores

In SeqGSEA: Gene Set Enrichment Analysis (GSEA) of RNA-Seq Data: integrating differential expression and splicing

Description

DEscore and DSscore are pre-calculated DE and DS scores, respectively; DEscore.perm and DSscore.perm are pre-calculated DE and DS scores on the permutation data sets, respectively; They are used in examples of the SeqGSEA package. Note that these scores are of no meaning but to demonstrate the usage of functions.

Usage

data("DEscore")
data("DEscore.perm")
data("DSscore")
data("DSscore.perm")

References

Xi Wang and Murray J. Cairns (2013). Gene Set Enrichment Analysis of RNA-Seq Data: Integrating Differential Expression and Splicing. BMC Bioinformatics, 14(Suppl 5):S16.

SeqGSEA documentation built on Nov. 8, 2020, 5:46 p.m.