estiGeneNBstat: Calculate NB-statistics quantifying differential splicing for...

Description Usage Arguments Value Note Author(s) References See Also Examples

View source: R/DSscore.R

Description

Calculate NB-statistics quantifying differential splicing for each gene between two groups of samples compared. The results will be used for GSEA run (as DS-scores).

Usage

1

Arguments

RCS

a ReadCountSet object after running estiExonNBstat.

Value

A ReadCountSet object with slot featureData_gene updated.

Note

Please run estiExonNBstat before run this function.

Author(s)

Xi Wang, xi.wang@newcastle.edu.au

References

Weichen Wang, Zhiyi Qin, Zhixing Feng, Xi Wang and Xuegong Zhang (2013). Identifying differentially spliced genes from two groups of RNA-seq samples. Gene, 518(1):164-170.

See Also

estiExonNBstat

Examples

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SeqGSEA documentation built on Nov. 8, 2020, 5:46 p.m.