SeqGeneSet object example


An exemplified SeqGeneSet object to demonstrate functions in the SeqGSEA package. This object was generated with collection #6 (C6) gene sets of the Molecular Signatures Database (MSigDB) v3.1.




Subramanian, A., Tamayo, P., Mootha, V. K., Mukherjee, S., Ebert, B. L., Gillette, M. A., Paulovich, A., Pomeroy, S. L., Golub, T. R., Lander, E. S., and Mesirov, J. P. (2005). Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles. Proc Natl Acad Sci USA, 102(43): 15545-50.

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