sig.oncotypedx: Signature used to compute the OncotypeDX signature as...

Description Usage Format References Examples

Description

List of 21 genes included in the OncotypeDX signature. The EntrezGene.ID allows for mapping and the mapping to affy probes is already provided.

Usage

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Format

sig.oncotypedx is a matrix with 5 columns containing the annotations and information related to the signature itself (including a mapping to Affymetrix HGU platform).

References

S. Paik, S. Shak, G. Tang, C. Kim, J. Bakker, M. Cronin, F. L. Baehner, M. G. Walker, D. Watson, T. Park, W. Hiller, E. R. Fisher, D. L. Wickerham, J. Bryant, and N. Wolmark (2004) "A Multigene Assay to Predict Recurrence of Tamoxifen-Treated, Node-Negative Breast Cancer", New England Journal of Medicine, 351(27):2817–2826.

Examples

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genefu documentation built on Nov. 17, 2017, 12:52 p.m.