Description Usage Arguments Value See Also Examples
View source: R/fitTimeSeries.R
Sets up a data-frame with the feature abundance, class information, time points, sample ids and returns the fitted values for the fitted model.
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formula |
Formula for ssanova. Of the form: abundance ~ ... where ... includes any pData slot value. |
abundance |
Numeric vector of abundances. |
class |
Class membership (factor of group membership). |
time |
Time point vector of relative times (same length as abundance). |
id |
Sample / patient id. |
include |
Parameters to include in prediction. |
pd |
Extra variable. |
... |
Extra parameters for ssanova function (see ?ssanova). |
A list containing:
data : Inputed data
fit : The interpolated / fitted values for timePoints
se : The standard error for CI intervals
timePoints : The time points interpolated over
cumNorm
fitTimeSeries
ssPermAnalysis
ssPerm
ssIntervalCandidate
1 | # Not run
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