View source: R/gotermlevelmf.R
Level2GOTermMF | R Documentation |
Gets all the molecular function (MF) GO-terms on a GO-level. The supported organisms are "Homo sapiens / Human", "Rattus norvegicus / Rat", "Mus musculus / Mouse", "Danio rerio / Zebrafish", "Caenorhabditis elegans / Worm" ,"Arabidopsis thaliana / Cress", "Saccharomyces cerevisiae / Yeast", "Schizosaccharomyces pombe / Fission yeast", "Drosophila melanogaster / Fruit fly", "Escherichia coli / E.coli".
Level2GOTermMF(level, organism = NULL)
level |
A numeric value for the GO-level |
organism |
The organism of interest. If NULL the results will be from the general GO MF tree |
A list of GO-terms from the level
The Gene Ontology (GO) molecular function (MF) tree was built using the root node GO:0003674
# Gene association GO-terms for organism Mouse on level 9 Level2GOTermMF(level = 9, organism = "mouse") # Gene association GO-terms for organism Zebrafish on level 10 Level2GOTermMF(level = 10, organism = "zebrafish")
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