Level2JumpNodeBP | R Documentation |
The function retrieves the Jump nodes (JNs) from a GO-level. JNs are those GO-terms which have at least one child term not present in the level below it. If the optional parameter "organism" is missing then the results are from the general GO tree. The supported organisms are "Homo sapiens / Human", "Rattus norvegicus / Rat", "Mus musculus / Mouse", "Danio rerio / Zebrafish", "Caenorhabditis elegans / Worm" ,"Arabidopsis thaliana / cress", "Saccharomyces cerevisiae / Yeast", "Schizosaccharomyces pombe / Fission yeast", "Drosophila melanogaster / Fruit fly", "Escherichia coli / E.coli".
Level2JumpNodeBP(level, organism = NULL)
level |
A numeric value for the GO-level |
organism |
Organism of interest that is supported by the package |
All jump nodes from the level
# Jump nodes from level 3
Level2JumpNodeBP(level = 3, organism = "Homo sapiens")
# Jump nodes from level 6
Level2JumpNodeBP(level = 6, organism = "Arabidopsis thaliana")
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