degreeDistMF: Degree distribution of the GO molecular function (MF) terms...

In GOxploreR: Structural Exploration of the Gene Ontology (GO) Knowledge Base

Degree distribution of the GO molecular function (MF) terms on a GO-level

Description

For a directed graph, the in-degree nodes are the nodes which have edges coming into them and the out-degree nodes are those which have edges going out of them. The degreeDistMF function shows the distribution of these degrees over a particular GO-level. A bar plot is obtain which shows how many nodes in the GO-level have a certain degree k.

Usage

degreeDistMF(level)

Arguments

level

A numeric value for the GO-level

Value

A plot showing the degree distribution

Examples

# Degree distribution of GO-terms on level 3
degreeDistMF(level = 3)

# Degree distribution of GO-terms on level 10
degreeDistMF(level = 10)

GOxploreR documentation built on April 11, 2025, 6:05 p.m.