Level2LeafNodeCC: GO cellular component (CC) level leaf nodes getter

In GOxploreR: Structural Exploration of the Gene Ontology (GO) Knowledge Base

GO cellular component (CC) level leaf nodes getter

Description

Derive all the leaf nodes from a GO CC level. The supported organism are "Homo sapiens / Human", "Rattus norvegicus / Rat", "Mus musculus / Mouse", "Danio rerio / Zebrafish", "Caenorhabditis elegans / Worm", "Arabidopsis thaliana / Cress", "Saccharomyces cerevisiae / Yeast", "Schizosaccharomyces pombe / Fission yeast", "Drosophila melanogaster / Fruit fly", "Escherichia coli / E.coli".

Usage

Level2LeafNodeCC(level, organism = NULL)

Arguments

level	A numeric value for the GO level
organism	An organism of interest from the list of supported organism. If the argument is NULL the results are from the general GO-DAG (default).

Value

All leaf nodes on the level

Examples

# level 6 leaf nodes for Yeast GO-DAG
Level2LeafNodeCC(6, "Yeast")

# level 4 leaf nodes for Mouse GO-DAG
Level2LeafNodeCC(4, "Mouse")

GOxploreR documentation built on Nov. 3, 2023, 5:08 p.m.