align.clustalw: Multiple sequence alignment by means of ClustalW
In MEET: MEET: Motif Elements Estimation Toolkit
Description
Usage
Arguments
Details
Value
Author(s)
See Also
Description
DNA sequences are aligned by means of ClustalW (Multiple Sequence Alignment).
Usage
1
align.clustalw(filein, fileout = "Sq.fa", call)
Arguments
filein
A set of nucleotide sequences in FASTA format.
fileout
Output file in FASTA format.
call
string of characters needed to call Clustalw from the working directory
Details
This function needs aaMI-package
Value
Fileout is a file in FASTA format with aligned nucleotide sequences.
Author(s)
Erola Pairo <epeiroatibec.pcb.ub.es> and Joan Maynou <joan.maynouatupc.edu>.
See Also
align.MEME, align.MUSCLE
MEET documentation built on May 2, 2019, 1:45 p.m.
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Description Usage Arguments Details Value Author(s) See Also
Description
DNA sequences are aligned by means of ClustalW (Multiple Sequence Alignment).
Usage
1 | align.clustalw(filein, fileout = "Sq.fa", call)
|
Arguments
filein |
A set of nucleotide sequences in FASTA format. |
fileout |
Output file in FASTA format. |
call |
string of characters needed to call Clustalw from the working directory |
Details
This function needs aaMI-package
Value
Fileout is a file in FASTA format with aligned nucleotide sequences.
Author(s)
Erola Pairo <epeiroatibec.pcb.ub.es> and Joan Maynou <joan.maynouatupc.edu>.
See Also
align.MEME, align.MUSCLE
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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