calcVarFit: Function for calculating the total variance fit

In RaceID: Identification of Cell Types, Inference of Lineage Trees, and Prediction of Noise Dynamics from Single-Cell RNA-Seq Data

Function for calculating the total variance fit

Description

This function calculates a total variance fit comprising sampling noise, global cell-to-cell variability of transcript counts, and biological variability.

Usage

calcVarFit(noise, norm = FALSE)

Arguments

noise	List of noise parameters returned by compTBNoise.
norm	Logical. If TRUE then total variance is normalized by the technical noise component (i.e., sampling noise plus global cell-to-cell variability in transcript counts.). Default is FALSE.

Value

Matrix of total variance fits.

RaceID documentation built on Sept. 28, 2023, 5:06 p.m.