compmedoids | R Documentation |
This functions computes cluster medoids given an SCseq
object and a clustering partition. The medoids are either derived from the
distance matrix or, if the slot distances
is empty, from the dimensionally reduced feature matrix in slot dimRed$x
using the euclidean metric.
compmedoids(object, part)
object |
|
part |
Clustering partition. A vector of cluster numbers for (a subset of) cells (i.e. column names)
of slot |
Returns a list of medoids (column names of slot ndata
from the SCseq
object) ordered by increasing cluster number.
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