imputeexp: Imputed expression matrix

In RaceID: Identification of Cell Types, Inference of Lineage Trees, and Prediction of Noise Dynamics from Single-Cell RNA-Seq Data

Imputed expression matrix

Description

This functions returns an imputed expression matrix based on the imputing computed with compdist.

Usage

imputeexp(object, genes = NULL)

Arguments

object	SCseq class object.
genes	vector of valid gene names corresponding to row names of slot ndata. Default is NULL and imputing is done for all genes.

Value

An expression matrix with imputed expression values after size normalization. Genes are in rows and cells in columns.

RaceID documentation built on Sept. 28, 2023, 5:06 p.m.