Files in RaceID
Identification of Cell Types, Inference of Lineage Trees, and Prediction of Noise Dynamics from Single-Cell RNA-Seq Data
MD5
NAMESPACE
DESCRIPTION
R/RcppExports.R
R/StemID.R
R/RaceID.R
R/intestinalData.R
R/RaceID_utils.R
R/StemID_utils.R
R/intestinalDataSmall.R
R/VarID_functions.R
R/cc_genes.R
src/Makevars
src/RcppExports.cpp
src/VarID.cpp
src/rcpp_hello_world.cpp
inst/doc/RaceID.Rmd
inst/doc/RaceID.R
inst/doc/RaceID.html
build/vignette.rds
vignettes/RaceID.Rmd
data/cc_genes.RData
data/intestinalData.RData
data/intestinalDataSmall.RData
man/testPrior.Rd
man/plotoutlierprobs.Rd
man/plotPT.Rd
man/updateSC.Rd
man/plotBackVar.Rd
man/Seurat2SCseq.Rd
man/plotbackground.Rd
man/compumap.Rd
man/plotPC.Rd
man/diffNoisyGenes.Rd
man/plotjaccard.Rd
man/plotsensitivity.Rd
man/diffNoisyGenesTB.Rd
man/getproj.Rd
man/Ltree.Rd
man/plotPearsonRes.Rd
man/imputeexp.Rd
man/plotQuantMap.Rd
man/cc_genes.Rd
man/pruneKnn.Rd
man/plotMV.Rd
man/clustheatmap.Rd
man/fitLogVarLogMean.Rd
man/projenrichment.Rd
man/plotfeatmap.Rd
man/corrVar.Rd
man/calcAlphaG.Rd
man/plotlabelsmap.Rd
man/SCseq.Rd
man/plotExpNoise.Rd
man/branchcells.Rd
man/plotlinkpv.Rd
man/plotTrProbs.Rd
man/violinMarkerPlot.Rd
man/cellsfromtree.Rd
man/graphCluster.Rd
man/plotdiffgenes.Rd
man/maxNoisyGenes.Rd
man/transitionProbs.Rd
man/plotPP.Rd
man/plotexpmap.Rd
man/quantKnn.Rd
man/fitGammaRt.Rd
man/calcVarFit.Rd
man/varRegression.Rd
man/compmedoids.Rd
man/clustdiffgenes.Rd
man/extractCounts.Rd
man/compfr.Rd
man/plotsymbolsmap.Rd
man/baseLineVar.Rd
man/barplotgene.Rd
man/calcVar.Rd
man/fitBackVar.Rd
man/compdist.Rd
man/projback.Rd
man/comptsne.Rd
man/plotmap.Rd
man/diffexpnb.Rd
man/cleanNN.Rd
man/comppvalue.Rd
man/fractDotPlot.Rd
man/getfdata.Rd
man/findoutliers.Rd
man/plotdimsat.Rd
man/compentropy.Rd
man/maxNoisyGenesTB.Rd
man/intestinalDataSmall.Rd
man/diffgenes.Rd
man/projcells.Rd
man/plotDiffNoise.Rd
man/plotRegNB.Rd
man/compNoise.Rd
man/plotB.Rd
man/compTBNoise.Rd
man/postfntb.Rd
man/plotdiffgenesnb.Rd
man/plotUMINoise.Rd
man/priorfn.Rd
man/filterdata.Rd
man/inspectKNN.Rd
man/plotsaturation.Rd
man/fitNBtbCl.Rd
man/plotmarkergenes.Rd
man/plotsilhouette.Rd
man/intestinalData.Rd
man/fitNBtb.Rd
man/getFilteredCounts.Rd
man/rfcorrect.Rd
man/getExpData.Rd
man/clustexp.Rd
man/pseudoTime.Rd
man/plotlinkscore.Rd
man/getNode.Rd
man/plotspantree.Rd
man/RaceID-package.Rd
man/plotdistanceratio.Rd
man/compMean.Rd
man/lineagegraph.Rd
man/compscore.Rd
man/CCcorrect.Rd
man/plotQQ.Rd
man/createKnnMatrix.Rd
man/plotgraph.Rd
man/plotNoiseModel.Rd
man/rcpp_hello_world.Rd
man/noiseBaseFit.Rd
