plotsilhouette: Plot Cluster Silhouette

In RaceID: Identification of Cell Types, Inference of Lineage Trees, and Prediction of Noise Dynamics from Single-Cell RNA-Seq Data

Plot Cluster Silhouette

Description

This functions produces a silhouette plot for RaceID3 clusters prior or post outlier identification.

Usage

plotsilhouette(object, final = FALSE)

Arguments

object	SCseq class object.
final	logical. If TRUE, then plot silhouette coefficients for final clusters after outlier identification. Default is FALSE and silhouette coefficients are plotted for initial clusters.

Value

None

RaceID documentation built on Sept. 28, 2023, 5:06 p.m.