getproj | R Documentation |
This function extracts projections of all cells in a cluster and plots a heatmap of these hierarchically clustered projections (rows) to all other clusters (columns). A minimum spanning tree of the cluster centers is overlaid for comparison.
getproj(object, i, show = TRUE, zscore = FALSE)
object |
|
i |
Cluster number. This number has to correspond to one of the RaceID3 clusters included for the StemID2 inference, i.e. to a number present
in slot |
show |
logical. If |
zscore |
logical. If |
A list ot two components:
pr |
a data.frame of projections for all cells in cluster |
prz |
a data.frame of z-transformed projections for all cells in cluster |
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