plotB: Boxplots for features across clusters

In RaceID: Identification of Cell Types, Inference of Lineage Trees, and Prediction of Noise Dynamics from Single-Cell RNA-Seq Data

Boxplots for features across clusters

Description

Function to generate boxplots of a feature vector across different clusters.

Usage

plotB(x, part, cluster = NULL, set = NULL, ...)

Arguments

x	Vector of real numbers.
part	Vector with cluster partition, e.g., element partition returned by the graphCluster function.
cluster	Positive integer corresponing to valid cluster number or NULL. If valid cluster number, then a horizontal line is drawn indicating the median value of x for the corresponding cluster. If NULL no line is drawn. Default is NULL.
set	Ordered set of valid cluster numbers. If box equals TRUE than data will only be plotted for these clusters in the give
...	Additional parameters of boxplot.

Value

None

RaceID documentation built on Sept. 28, 2023, 5:06 p.m.