plotBackVar: Function for plottinhg the background model of gene...

In RaceID: Identification of Cell Types, Inference of Lineage Trees, and Prediction of Noise Dynamics from Single-Cell RNA-Seq Data

Function for plottinhg the background model of gene expression variability

Description

This function plots the variance against mean expression across all genes and a second order polynomial to the variance-mean dependence in log space. It also plots a local regression.

Usage

plotBackVar(x)

Arguments

x	List object returned by function fitBackVar or list object returned by function pruneKnn (if it was run with FSelect=TRUE).

Value

None

Examples

bg <- fitBackVar(intestinalDataSmall)
plotBackVar(bg)

RaceID documentation built on Sept. 28, 2023, 5:06 p.m.