plotdistanceratio: Histogram of Cell-to-Cell Distances in Real versus Embedded...

In RaceID: Identification of Cell Types, Inference of Lineage Trees, and Prediction of Noise Dynamics from Single-Cell RNA-Seq Data

Histogram of Cell-to-Cell Distances in Real versus Embedded Space

Description

This function plots a histogram of the ratios of cell-to-cell distances in the original versus the high-dimensional embedded space used as input for the StemID2 inferences. The embedded space approximates correlation-based distances by Euclidean distances obtained by classical multi-dimensional scaling. A minimum spanning tree of the cluster centers is overlaid for comparison.

Usage

plotdistanceratio(object)

Arguments

object

Ltree class object.

Value

None.

RaceID documentation built on Sept. 28, 2023, 5:06 p.m.