complement_fast: Fast complement and reverse complement

View source: R/tm_nn.R

complement_fastR Documentation

Fast complement and reverse complement

Description

Uses chartr() instead of character-by-character translation. ~10x faster than the seqinr-style implementation for long sequences.

Usage

complement_fast(seq_str, rev = FALSE)

Arguments

seq_str

Character string or vector.

rev

Logical. Return reverse complement? Default FALSE.

Value

Character string(s) with complement.


TmCalculator documentation built on Aug. 28, 2026, 5:09 p.m.