dot-tm_task_fasta: One task against a FASTA file

.tm_task_fastaR Documentation

One task against a FASTA file

Description

Reads only its own records, with skip and nrec, so the sequence never travels between processes.

Usage

.tm_task_fasta(task, src, window, slide, keep_sequence, model)

Arguments

task

A task from .tm_tasks.

src

BSgenome package name.

window, slide, keep_sequence, model

As in .tm_run.

Value

A GRanges.


TmCalculator documentation built on Oct. 5, 2026, 5:08 p.m.