dot-tm_as_granges: Read 'regions' as an interval query against a GRanges source
In TmCalculator: Genome-Wide Nucleic Acid Melting Temperature Profiling and Multi-Omics Integration
.tm_as_granges R Documentation
Read 'regions' as an interval query against a GRanges source
Description
"chr1" means the whole of that seqname and
"chr1:1000-2000" means that interval of it. A vector of bare
integers is positional instead, the nth ranges, which is what the same
input means for a FASTA file or for sequences; NULL is returned in
that case so the caller resolves it by position.
Usage
.tm_as_granges(regions, src)
Arguments
regions
Character or numeric regions.
src
A GRanges source from .tm_source.
Value
A GRanges to overlap against, or NULL for positional.
TmCalculator documentation built on Oct. 5, 2026, 5:08 p.m.
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| .tm_as_granges | R Documentation |
Read 'regions' as an interval query against a GRanges source
Description
"chr1" means the whole of that seqname and
"chr1:1000-2000" means that interval of it. A vector of bare
integers is positional instead, the nth ranges, which is what the same
input means for a FASTA file or for sequences; NULL is returned in
that case so the caller resolves it by position.
Usage
.tm_as_granges(regions, src)
Arguments
regions |
Character or numeric regions. |
src |
A GRanges source from |
Value
A GRanges to overlap against, or NULL for positional.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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