dot-filter_N_windows: Filter windows with too many N bases
In TmCalculator: Genome-Wide Nucleic Acid Melting Temperature Profiling and Multi-Omics Integration
.filter_N_windows R Documentation
Filter windows with too many N bases
Description
Reads each window sequence and drops those where the N fraction
exceeds max_N_frac. Uses batched getSeq for efficiency.
Usage
.filter_N_windows(bsgenome, chr, win_starts, win_ends, max_N_frac, window)
TmCalculator documentation built on Aug. 28, 2026, 5:09 p.m.
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| .filter_N_windows | R Documentation |
Filter windows with too many N bases
Description
Reads each window sequence and drops those where the N fraction exceeds max_N_frac. Uses batched getSeq for efficiency.
Usage
.filter_N_windows(bsgenome, chr, win_starts, win_ends, max_N_frac, window)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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