API for TmCalculator
Genome-Wide Nucleic Acid Melting Temperature Profiling and Multi-Omics Integration
| Global functions | |
|---|---|
| $.TmCalculator | Man page |
| .as_gr_seq | Source code |
| .build_all_tm_tables | Source code |
| .chem_correct_vec | Man page Source code |
| .col_has_n | Source code |
| .complete_nn_rc | Source code |
| .fasta_lengths | Man page Source code |
| .filter_N_windows | Man page Source code |
| .find_N_bounds | Man page Source code |
| .gc_vec | Man page Source code |
| .get_bsgenome_from_pkg | Man page Source code |
| .getseq_preload_chr | Man page Source code |
| .getseq_vectorized | Man page Source code |
| .load_genome_packages | Man page Source code |
| .normalise_override | Source code |
| .normalize_tm_gc_metadata | Man page Source code |
| .parse_coord_strings | Man page Source code |
| .resolve_bsgenome | Source code |
| .resolve_pkg_name | Source code |
| .resolve_table | Source code |
| .rev_str | Source code |
| .right_key | Source code |
| .salt_correct_vec | Man page Source code |
| .spill_fasta | Man page Source code |
| .tbl_label | Source code |
| .tbl_row | Source code |
| .tbl_to_cpp | Source code |
| .tm_as_granges | Man page Source code |
| .tm_complete_gr | Man page Source code |
| .tm_finish | Man page Source code |
| .tm_gc_chunk | Source code |
| .tm_match | Man page Source code |
| .tm_model | Man page Source code |
| .tm_nn_chunk | Source code |
| .tm_nn_chunk_r | Source code |
| .tm_nn_core | Source code |
| .tm_offsets | Man page Source code |
| .tm_regions | Man page Source code |
| .tm_run | Man page Source code |
| .tm_source | Man page Source code |
| .tm_task_bsgenome | Man page Source code |
| .tm_task_fasta | Man page Source code |
| .tm_tasks | Man page Source code |
| .tm_wallace_chunk | Source code |
| .verify_nn_tables | Source code |
| .warn_if_reverse_complement | Source code |
| .warn_wallace_length | Source code |
| TmCalculator | Man page |
| TmCalculator-package | Man page |
| `$.TmCalculator` | Source code |
| `%||%` | Source code |
| check_filter_seq | Man page Source code |
| chem_correct | Man page Source code |
| compare_groups | Man page Source code |
| complement_fast | Man page Source code |
| coor_to_genomic_ranges | Man page Source code |
| cpp_base_counts | Source code |
| cpp_tm_nn_dhds | Source code |
| ecoli_rep_hotspots | Man page |
| fa_to_genomic_ranges | Man page Source code |
| gc_content | Man page Source code |
| generate_complement | Man page Source code |
| get_end_table | Source code |
| get_table | Source code |
| integrate_granges | Man page Source code |
| make_genomiccoord | Man page Source code |
| plot_genome_track | Man page Source code |
| plot_tm | Man page Source code |
| print.TmCalculator | Man page Source code |
| s2c | Man page Source code |
| salt_correct | Man page Source code |
| thermodynamic_gc_params | Man page |
| thermodynamic_nn_params | Man page |
| tm_calculate | Man page Source code |
| tm_gc | Man page Source code |
| tm_nn | Man page Source code |
| tm_wallace | Man page Source code |
| to_genomic_ranges | Man page Source code |
| to_genomic_ranges_fast | Man page Source code |
| vec_to_genomic_ranges | Man page Source code |
